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Consider this post as a personal note to my future self I have just learnt that Bioconductor developers should NOT always use the development version. On the official website it says: This means that, from mid-October through mid-April, Bioconductor developers should be developing against R-devel. From mid-April to mid-October, developers should use R-release (actually, the R snapshot from the R-x-y-branch) for Bioconductor development. So I needed to change my R version from development to release and I did.

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scfind is a tool that allows one to search large single cell RNA-Seq collections using either cells, gene lists or GO term lists…

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I have just updated this website with an academic theme and it looks amazing…

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Thousands of times I’ve heard of the Gene Set Enrichment Analysis or GSEA. Thousands of times I tried to run it and thousands of times I failed…

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Happy 2017! I am back here and ready to start posting in my blog! See what I can do now…

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Projects

SC3

A tool for unsupervised clustering and analysis of single cell RNA-Seq data.

cloud scmap

A Cloud-based tool for unsupervised projection of single cell RNA-seq data (logo created by Symbolon from the Noun Project).

scRNA-Seq datasets

A collection of publicly available scRNA-Seq datasets used by the Hemberg Group at the Sanger Institute (logo created by Dmitry Mirolyubov from the Noun Project).

scRNA-seq course

A course on analysis of single cell RNA-seq data (logo created by Becris from the Noun Project).

scmap

A tool for unsupervised projection of single cell RNA-seq data.

My PhD thesis

Computational study of electrostatic contribution to membrane dynamics

My chords

A collection of guitar songs I like to sing (logo created by Arthur Shlain from the Noun Project)

ftl1.support

A website to support my secondary school (in Russian).

St Ephraim Orthodox Parish

A website I developed for our parish.